Dataset for the article: Genome-wide fitness analysis identifies genes required for in vitro growth and macrophage infection by African and global epidemic pathovariants of Salmonella enterica Enteritidis

Fong, Wai Yee, Canals, Rocío, Predeus, Alexander V., Perez-Sepulveda, Blanca, Wenner, Nicolas, Lacharme-Lora, Lizeth, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405, Wigley, Paul and Hinton, Jay C. D. (2023) Dataset for the article: Genome-wide fitness analysis identifies genes required for in vitro growth and macrophage infection by African and global epidemic pathovariants of Salmonella enterica Enteritidis. [Data Collection]

Summary

Data Summary

Illumina transposon insertion sequencing (TIS) data have been deposited in the European Nucleotide Archive (ENA) repository (EMBL-EBI) under accession number PRJEB52017. JBrowse genome browsers showing the precise location of transposon insertions across the respective Salmonella enterica Enteritidis genomes are available at the URLs https://tinyurl.com/GECP125109 and https://tinyurl.com/CEACD7795. The pipeline for bioinformatic processing and analysis of S. enterica Enteritidis TIS data is available at the URL https://github.com/apredeus/TRADIS. All Supplementary Material items are available in the Figshare repository at https://doi.org/10.6084/m9.figshare.21720416.v1 [1].

Supplementary Material for 'Genome-wide fitness analysis identifies genes required for in vitro growth and macrophage infection by African and global epidemic pathovariants of Salmonella enterica Enteritidis’, as described in Microbial Genomics.