Browse by Datasets

A

Abouyannis, Michael ORCID: https://orcid.org/0000-0003-4856-4334, Boga, Mwanamvua, David, Amadi, Ouma, Nelson, Nyaguara, Amek, Mturi, Neema, Berkley, James A., Adetifa, Ifedayo M., Casewell, Nicholas R., Lalloo, David ORCID: https://orcid.org/0000-0001-7680-2200 and Hamaluba, Mainga (2023) Dataset for the article: A long-term observational study of paediatric snakebite in Kilifi County, south-east Kenya. [Data Collection]

Aiken, Alexander and Rehman, AM (2023) Dataset for the article: MBIRA - Mortality from Bacterial Infections Resistant to Antibiotics study - underlying data. [Data Collection]

Al-Jawabreh, Reem, Anderson, Roy, Atkinson, Louise, Bickford-Smith, Jack, Bradbury, Richard and Breloer, Minka (2023) Supplementary material from "Strongyloides questions – a research agenda for the future". [Data Collection]

Ashton, Philip and Henrion, Marc ORCID: https://orcid.org/0000-0003-1242-839X (2023) Dataset for the article: Evaluating the relationship between ciprofloxacin prescription and non-susceptibility in Salmonella Typhi in Blantyre, Malawi: an observational study. [Data Collection]

B

Ball, Jonathan (2023) Dataset for the article: Revisiting the origins of the Sobemovirus genus: A case for ancient origins of plant viruses. [Data Collection]

C

Carlton, Jane and vanEijk, Anna ORCID: https://orcid.org/0000-0003-1635-1289 (2023) Dataset for the article: The effectiveness of malaria camps as part of the malaria control program in Odisha, India. [Data Collection]

Carter, Naomi, Webb, Emily L, Lebina, Limakatso, Motsomi, Kegaugetswe, Bosch, Zama, Martinson, Neil A. and MacPherson, Peter ORCID: https://orcid.org/0000-0002-0329-9613 (2023) Dataset for the article: Prevalence of subclinical pulmonary tuberculosis and its association with HIV in household contacts of index tuberculosis patients in two South African provinces: a secondary, cross-sectional analysis of a cluster-randomised trial. [Data Collection]

Caws, Maxine ORCID: https://orcid.org/0000-0002-9109-350X (2023) Data for 'Identification of bacterial determinants of tuberculosis infection and treatment outcomes: a phenogenomic analysis of clinical strains'. [Data Collection]

Chappell, Elizabeth, Chimwaza, Anesu, Manika, Ngoni, Wedderburn, Catherine J., Mupambireyi Nenguke, Zivai, Gannon, Hannah, Cowan, Frances ORCID: https://orcid.org/0000-0003-3087-4422, Gibb, Tom, Heys, Michelle, Fitzgerald, Felicity, Phillips, Andrew, Chimhuya, Simbarashe, Gibb, Diana M., Ford, Deborah, Mushav, Angela and Bwakura-Dangarembizi, Mutsa (2023) Dataset for the article: Impact of the COVID-19 pandemic on the provision and uptake of services for the prevention of mother-to-child transmission of HIV in Zimbabwe. [Data Collection]

Choko, Augustine and Corbett, EL (2023) Dataset for the article: Baseline data for the fishermen’s schistosomiasis and HIV services (FISH) cluster randomized trial in Mangochi, Malawi. [Data Collection]

D

Defres, Sylviane, Tharmaratnam, Kukatharmini, Michael, Benedict D., Ellul, Mark, Davies, Nicholas W. S., Easton, Ava, Griffiths, Michael J., Bhojak, Maneesh, Das, Kumar, Hardwick, Hayley, Cheyne, Chris, Kneen, Rachel, Medina-Lara, Antonieta, Salter, Anne Christine, Beeching, Nicholas J., Carrol, Enitan, Vincent, Angela, Garcia-Finana, Marta and Solomon, Tom (2023) Dataset for the article: Clinical predictors of encephalitis in UK adults–A multi-centre prospective observational cohort study. [Data Collection]

E

ElSafadi, Dima (2023) Dataset for the article: Parasitic Contamination of Fresh Leafy Green Vegetables Sold in Northern Lebanon. [Data Collection]

Epstein, Adrienne, Namuganga, Jane Frances, Nabende, Isaiah, Kamya, Emmanuel Victor, Kamya, Moses R, Dorsey, Grant, Sturrock, Hugh, Bhatt, Samir, Rodríguez-Barraquer, Isabel and Greenhouse, Bryan (2023) Dataset for the article: Mapping malaria incidence using routine health facility surveillance data in Uganda. [Data Collection]

F

Fong, Wai Yee, Canals, Rocío, Predeus, Alexander V., Perez-Sepulveda, Blanca, Wenner, Nicolas, Lacharme-Lora, Lizeth, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405, Wigley, Paul and Hinton, Jay C. D. (2023) Dataset for the article: Genome-wide fitness analysis identifies genes required for in vitro growth and macrophage infection by African and global epidemic pathovariants of Salmonella enterica Enteritidis. [Data Collection]

Forse, Rachel and Caws, Maxine ORCID: https://orcid.org/0000-0002-9109-350X (2023) Dataset for the article: A qualitative assessment on the acceptability of providing cash transfers and social health insurance for tuberculosis-affected families in Ho Chi Minh City, Vietnam. [Data Collection]

G

Galafa, Bridgette, Howard, Ashleigh, Nyazika, Tinashe, Ferreira, Daniela ORCID: https://orcid.org/0000-0002-0594-0902, Jambo, Kondwani ORCID: https://orcid.org/0000-0002-3195-2210, Morton, Ben ORCID: https://orcid.org/0000-0002-6164-2854, Henrion, Marc ORCID: https://orcid.org/0000-0003-1242-839X and Gordon, Stephen ORCID: https://orcid.org/0000-0001-6576-1116 (2023) Dataset for 'Natural carriage of Streptococcus pneumoniae is associated with increased experimental pneumococcal carriage but reduced conjugate vaccine efficacy in a human challenge model'. [Data Collection]

Gibbons, Luz and Lavender, Tina (2023) Database and Syntax for Analysis of the Paper: "Effects of introducing the WHO Labour Care Guide on Caesarean section: a pragmatic, stepped-wedge, cluster randomized trial in India". [Data Collection]

H

Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Pearse, Oliver, Musicha, Patrick, Graf, Fabrice, Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188 and Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 (2023) Data for 'Longitudinal analysis within one hospital in sub-Saharan Africa over 20 years reveals repeated replacements of dominant clones of Klebsiella pneumoniae and stresses the importance to include temporal patterns for vaccine design considerations'. [Data Collection]

J

Jeffries, Claire and Walker, Thomas (2023) Dataset for the article: Mitochondrial and microbial diversity of the invasive mosquito vector species Culex tritaeniorhynchus across its extensive inter-continental geographic range. [Data Collection]

K

Kampango, Ayubo, Smith, Thomas, Abílio, Ana Paula, Machoe, Elias Alberto, Matusse, Júlio, Pinto, João and McCall, Philip ORCID: https://orcid.org/0000-0002-0007-3985 (2023) Dataset for the article: The Shockwè trap: a human-baited exposure-free device for surveillance and behaviour studies of anthropophilic vectors. [Data Collection]

L

Laprade, William, Bartlett, Keirah, Kazandjian, Taline ORCID: https://orcid.org/0000-0002-5383-0505, Patel, Rohit, Crittenden, Edouard, Dawson, Charlotte, Casewell, Nicholas ORCID: https://orcid.org/0000-0002-8035-4719 and Hall, Steven (2023) Dataset for the article: Machine-learning guided Venom Induced Dermonecrosis Analysis tooL: VIDAL. [Data Collection]

Lester, Rebecca ORCID: https://orcid.org/0000-0002-0259-9630, Mango, James, Mallewa, Jane, Jewell, Christopher P., Lalloo, David ORCID: https://orcid.org/0000-0001-7680-2200, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 and Maheswaran, Hendramoorthy (2023) Dataset for the article: Individual and population level costs and health-related quality of life outcomes of third-generation cephalosporin resistant bloodstream infection in Blantyre, Malawi. [Data Collection]

Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beala, Mathew A., Mallewa, Jane, Anscombe, Catherine, Zuza, Allan, Roberts, Adam P., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Thomson, Nicholas R. and Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 (2023) Dataset for the article: Genomic analysis of extended-spectrum beta-lactamase (ESBL) producing Escherichia coli colonising adults in Blantyre, Malawi reveals previously undescribed diversity. [Data Collection]

Lord, Jennifer (2023) Dataset for the article: Mechanistic modelling of within-mosquito viral dynamics: Insights into infection and dissemination patterns. [Data Collection]

M

MacPherson, Eleanor ORCID: https://orcid.org/0000-0002-7142-1158, Mankhomwa, John, Dixon, Justin, Pongolani, Raymond, Phiri, Mackwellings, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405, O'Byrne, Thomasena, Tolhurst, Rachel ORCID: https://orcid.org/0000-0002-3005-6641 and MacPherson, Peter ORCID: https://orcid.org/0000-0002-0329-9613 (2023) Dataset for the article: Household antibiotic use in Malawi: A cross-sectional survey from urban and peri-urban Blantyre. [Data Collection]

Makanga, Prestige Tatenda (2023) Dataset for 'Measuring geographic access to emergency obstetric care: a comparison of travel time estimates modelled using Google Maps Directions API and AccessMod in three Nigerian conurbations'. [Data Collection]

Marriott, Amy, Dagley, Jessica, Hegde, S, Steven, Andrew, Fricks, C., DiCosty, U., Mansour, A., Campbell, E. J., Wilson, C. M., Gusovsky, F., Ward, Stephen ORCID: https://orcid.org/0000-0003-2331-3192, Hong, W. D., O'Neill, P., Moorhead, A., McCall, S., McCall, J. W., Taylor, Mark ORCID: https://orcid.org/0000-0003-3396-9275 and Turner, Joseph ORCID: https://orcid.org/0000-0002-2185-5476 (2023) Dataset for the article: Dirofilariasis mouse models for heartworm preclinical research. [Data Collection]

Murphy, Caitriona, Lim, Way Wen, Mills, Cathal, Wong, Jessica Y., Chen, Dongxuan, Li, Mingwei, Xie, Yanmy, Gould, Susan, Xin, Hualei, Cheung, Justin K., Bhatt, Samir, Cowling, Benjamin J. and Donnelly, Christl A. (2023) Dataset for the article: Effectiveness of social distancing measures and lockdowns for reducing transmission of COVID-19 in non-healthcare, community-based settings. [Data Collection]

N

Nongley, Nkemngo Francis and Wondji, Charles ORCID: https://orcid.org/0000-0003-0791-3673 (2023) Dataset for the article: Epidemiology of malaria, schistosomiasis, and geohelminthiasis amongst children 3-15 years of age during the dry season in Northern Cameroon. [Data Collection]

O

Othman, Basim, Zeef, Leo, Szestak, Tadge, Rchiad, Zineb, Storm, Janet ORCID: https://orcid.org/0000-0001-7812-4220, Askonas, Caroline, Satyam, Rohit, Madkhali, Aymen, Haley, Michael, Wagstaff, Simon ORCID: https://orcid.org/0000-0003-0577-5537, Pain, Arnab and Craig, Alister ORCID: https://orcid.org/0000-0003-0914-6164 (2023) Dataset for the article: Different PfEMP1-expressing Plasmodium falciparum variants induce divergent endothelial transcriptional responses during co-culture. [Data Collection]

P

Padidar, Sara, Monadjem, Ara, Litschka-Koen, Thea, Mbongiseni, Mathobela, Dlamini, Quinton, Casewell, Nicholas ORCID: https://orcid.org/0000-0002-8035-4719, Lalloo, David ORCID: https://orcid.org/0000-0001-7680-2200, Harrison, Robert, Stienstra, Ymkje and Dlamini, Wisdom M (2023) Dataset for the article: Snakebite epidemiology, outcomes and multi-cluster risk modelling in Eswatini. [Data Collection]

Phillips, Andrew, Sibanda, Euphemia ORCID: https://orcid.org/0000-0003-1754-1076 and Cowan, Frances ORCID: https://orcid.org/0000-0003-3087-4422 (2023) Dataset for the article: Potential cost-effectiveness of community availability of tenofovir, lamivudine, and dolutegravir for HIV prevention and treatment in east, central, southern, and west Africa: a modelling analysis. [Data Collection]

R

Reimer, Lisa ORCID: https://orcid.org/0000-0002-9711-4981 (2023) Dataset for the article: Knockdown resistance allele L1014F introduced by CRISPR/Cas9 is not associated with altered vector competence of Anopheles gambiae for o’nyong nyong virus. [Data Collection]

S

Santus, Luisa, Sopena-Rios, Maria, García-Pérez, Raquel, Lin, Aaron E., Adams, Gordon C., Barnes, Kayla, Siddle, Katherine J., Wohl, Shirlee, Reverter, Ferran, Rinn, John L., Bennett, Richard S., Hensley, Lisa E., Sabeti, Pardis C. and Melé, Marta (2023) Dataset for the article: Single-cell profiling of lncRNA expression during Ebola virus infection in rhesus macaques. [Data Collection]

Schade, Alexander ORCID: https://orcid.org/0000-0001-7640-9812, Sabawo, Maureen, Nyamulani, Nohakhelha, Mpanga, Chikumbutso Clara, Ngoie, Leonard Banza, Metcalfe, Andrew, Lalloo, David ORCID: https://orcid.org/0000-0001-7680-2200, Madan, Jason J, Harrison, William James and MacPherson, Peter ORCID: https://orcid.org/0000-0002-0329-9613 (2023) Dataset for the article: Functional outcomes and quality of life at 1-year follow-up after an open tibia fracture in Malawi: a multicentre, prospective cohort study. [Data Collection]

Shrestha, Sourya and Caws, Maxine ORCID: https://orcid.org/0000-0002-9109-350X (2023) Dataset for the article: Quantifying the potential epidemiological impact of a two-year active case finding for tuberculosis in rural Nepal: A model-based analysis. [Data Collection]

Stanton, Michelle C ORCID: https://orcid.org/0000-0002-1754-4894 (2023) Data for 'Small dams drive Anopheles abundance during the dry season in a high malaria burden area of Malawi'. [Data Collection]

W

Walker, Naomi ORCID: https://orcid.org/0000-0002-3345-7694 (2023) Data for 'Factors influencing uptake of protective behaviours by healthcare workers in England during the COVID-19 pandemic: A theory-based mixed-methods study'. [Data Collection]

Weaving, Hester, Haines, Lee ORCID: https://orcid.org/0000-0001-8821-6479 and Lord, Jennifer (2023) Dataset for the article: No evidence for direct thermal carryover effects on starvation tolerance in the obligate blood‐feeder, Glossina morsitans morsitans. [Data Collection]

White, Sarah ORCID: https://orcid.org/0000-0001-5535-8075, Mgawadere, Florence ORCID: https://orcid.org/0000-0003-3341-9118, Gopalakrishnan, Somla ORCID: https://orcid.org/0000-0002-7833-5367 and van den Broek, Nynke ORCID: https://orcid.org/0000-0001-8523-2684 (2023) Dataset for the article: Standards-based audit to improve quality of maternal and newborn care – a stepped-wedge cluster randomised trial in Malawi. [Data Collection]

Y

Yalla, Nick, Polo, Brian, McDermott, Daniel, Kosgei, Jackline, Omondi, Seline, Agumba, Silas, Moshi, Vincent, Abong’o, Bernard, Gimnig, John E., Harris, Angela F., Entwistle, Julian, Long, Peter R. and Ochomo, Eric (2023) Dataset for the article: A comparison of the attractiveness of flowering plant blossoms versus attractive targeted sugar baits (ATSBs) in western Kenya. [Data Collection]