Items where Subject is "QW Microbiology and Immunology > QW 4 General works. Classify here works on microbiology as a whole."

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Ackers-Johnson, Gavin, Pulmones, Ralfh, McLaughlan, Danielle, Doyle, Amy, Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188, Neal, Tim, Todd, Stacy and Roberts, Adam ORCID: https://orcid.org/0000-0002-0760-3088 (2024) 'Investigating the changing taxonomy and antimicrobial resistance of bacteria isolated from door handles in a new infectious disease ward pre- and post-patient admittance'. Microbiology Spectrum. (In Press)

Adams, Emily ORCID: https://orcid.org/0000-0002-0816-2835, Ainsworth, Mark, Anand, Rekha, Andersson, Monique I., Auckland, Kathryn, Baillie, J. Kenneth, Barnes, Eleanor, Beer, Sally, Bell, John I., Berry, Tamsin, Bibi, Sagida, Carroll, Miles, Chinnakannan, Senthil K., Clutterbuck, Elizabeth, Cornall, Richard J., Crook, Derrick W., de Silva, Thushan, Dejnirattisai, Wanwisa, Dingle, Kate E., Dold, Christina, Espinosa, Alexis, Eyre, David W., Farmer, Helen, Fernandez Mendoza, Maria, Georgiou, Dominique, Hoosdally, Sarah J., Hunter, Alastair, Jefferey, Katie, Kelly, Dominic F., Klenerman, Paul, Knight, Julian, Knowles, Clarice, Kwok, Andrew J., Leuschner, Ullrich, Levin, Robert, Liu, Chang, López-Camacho, César, Martinez, Jose, Matthews, Philippa C., McGivern, Hannah, Mentzer, Alexander J., Milton, Jonathan, Mongkolsapaya, Juthathip, Moore, Shona C., Oliveira, Marta S., Pereira, Fiona, Perez, Elena, Peto, Timothy, Ploeg, Rutger J., Pollard, Andrew, Prince, Tessa, Roberts, David J., Rudkin, Justine K., Sanchez, Veronica, Screaton, Gavin R., Semple, Malcolm G., Slon-Campos, Jose, Skelly, Donal T., Smith, Elliot Nathan, Sobrinodiaz, Alberto, Staves, Julie, Stuart, David I., Supasa, Piyada, Surik, Tomas, Thraves, Hannah, Tsang, Pat, Turtle, Lance, Walker, A. Sarah, Wang, Beibei, Washington, Charlotte, Watkins, Nicholas and Whitehouse, James (2020) 'Antibody testing for COVID-19: A report from the National COVID Scientific Advisory Panel'. Wellcome Open Research, Vol 5, p. 139.

Adler, Hugh ORCID: https://orcid.org/0000-0003-4437-2298, German, Esther, Mitsi, Elena, Nikolaou, Elissavet, Pojar, Sherin ORCID: https://orcid.org/0000-0002-7746-3279, Hales, Caz, Robinson, Rachel, Connor, Victoria, Hill, Helen, Hyder-Wright, Angela, Lazarova, Lepa, Lowe, Catherine, Smith, Emma, Wheeler, India, Zaidi, Seher, Jochems, Simon ORCID: https://orcid.org/0000-0002-4835-1032, Loukov, Dessi, Reiné, Jesús, SolorzanoGonzalez, Carla, de Gorguette d’Argoeuves, Polly, Jones, Tessa, Goldblatt, David, Chen, Tao ORCID: https://orcid.org/0000-0002-5489-6450, Aston, Stephen J, French, Neil, Collins, Andrea ORCID: https://orcid.org/0000-0002-4094-1572, Gordon, Stephen ORCID: https://orcid.org/0000-0001-6576-1116, Ferreira, Daniela ORCID: https://orcid.org/0000-0002-0594-0902 and Rylance, Jamie ORCID: https://orcid.org/0000-0002-2323-3611 (2021) 'Experimental Human Pneumococcal Colonization in Older Adults is Feasible and Safe, Not Immunogenic'. American Journal of Respiratory and Critical Care Medicine, Vol 203, Issue 5, pp. 604-613.

Adler, Hugh ORCID: https://orcid.org/0000-0003-4437-2298, Ferreira, Daniela ORCID: https://orcid.org/0000-0002-0594-0902, Gordon, Stephen ORCID: https://orcid.org/0000-0001-6576-1116 and Rylance, Jamie ORCID: https://orcid.org/0000-0002-2323-3611 (2017) 'Pneumococcal capsular polysaccharide immunity in the elderly.'. Clinical and vaccine immunology : CVI, Vol 24, Issue 6, e00004-17.

Ainsworth, Stuart ORCID: https://orcid.org/0000-0002-0199-6482, Petras, Daniel, Engmark, Mikael, Sussmuth, Roderich, Whiteley, Gareth, Albulescu, Laura-Oana ORCID: https://orcid.org/0000-0001-6563-9217, Kazandijan, Taline D, Wagstaff, Simon ORCID: https://orcid.org/0000-0003-0577-5537, Rowley, Paul, Wüster, Wolfgang, Dorrestein, Pieter C., Arias, Ana Silvia, Gutiérrez, José M., Harrison, Robert, Casewell, Nicholas ORCID: https://orcid.org/0000-0002-8035-4719 and Calvete, Juan J (2018) 'The medical threat of mamba envenoming in sub-Saharan Africa revealed by genus-wide analysis of venom composition, toxicity and antivenomics profiling of available antivenoms.'. Journal of Proteomics, Vol 192, pp. 173-189.

Anton-Vazquez, Vanesa, Hine, Paul, Krishna, Sanjeev, Chaplin, Martha and Planche, Timothy (2021) 'Rapid versus standard antimicrobial susceptibility testing to guide treatment of bloodstream infection'. Cochrane Database of Systematic Reviews, Vol 4, CD013235.

Babiker, H. A., Hastings, Ian ORCID: https://orcid.org/0000-0002-1332-742X and Swedberg, G. (2009) 'Impaired fitness of drug-resistant malaria parasites: evidence and implication on drug-deployment policies'. Expert Review of Anti-Infective Therapy, Vol 7, Issue 5, pp. 581-593.

Beeching, Nicholas ORCID: https://orcid.org/0000-0002-7019-8791, Rautelin, Hilpi, Stahl, Jean-Paul and Leegaard, Truls M (2021) 'Training and assessment of medical specialists in clinical microbiology and Infectious Diseases in europe'. Clinical Microbiology and Infection, Vol 27, Issue 11, pp. 1581-1588.

Bereswill, Stefan, Cooper, Philip, Walker, Alan W., Reyes, Jorge, Chico, Martha, Salter, Susannah J., Vaca, Maritza and Parkhill, Julian (2013) 'Patent Human Infections with the Whipworm, Trichuris trichiura, Are Not Associated with Alterations in the Faecal Microbiota'. PLoS ONE, Vol 8, Issue 10, e76573.

Blockley, Alix, Elliott, David R., Roberts, Adam ORCID: https://orcid.org/0000-0002-0760-3088 and Sweet, Michael (2017) 'Symbiotic Microbes from Marine Invertebrates: Driving a New Era of Natural Product Drug Discovery'. Diversity, Vol 9, Issue 4, e49.

Blundell, Pat ORCID: https://orcid.org/0000-0003-3386-5660, Lu, Dongli, Dell, Anne, Haslam, Stuart and Pleass, Richard ORCID: https://orcid.org/0000-0001-7438-8296 (2020) 'Choice of Host Cell Line Is Essential for the Functional Glycosylation of the Fc Region of Human IgG1 Inhibitors of Influenza B Viruses'. Journal of Immunology, Vol 204, Issue 4, pp. 1022-1034.

Byrne, Rachel ORCID: https://orcid.org/0000-0001-5398-3125, Cocker, Derek, Aljayyoussi, Ghaith, Mphasa, Madalitso, Charles, Mary, Mandula, Tamandani, Williams, Chris, Rigby, Jonathan, Hearn, Jack ORCID: https://orcid.org/0000-0003-3358-4949, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405, Adams, Emily ORCID: https://orcid.org/0000-0002-0816-2835 and Edwards, Thomas (2022) 'A novel, magnetic bead‐based extraction method for the isolation of antimicrobial resistance genes with a case study in river water in Malawi'. Journal of Applied Microbiology, Vol 133, Issue 5, pp. 3191-3200.

Cansado-Utrilla, Cintia, Zhao, Serena Y., McCall, Philip ORCID: https://orcid.org/0000-0002-0007-3985, Coon, Kerri L. and Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 (2021) 'The microbiome and mosquito vectorial capacity: rich potential for discovery and translation'. Microbiome, Vol 9, Issue 111.

Chinowaita, Frank, Chaka, Wendy, Nyazika, Tinashe, Maboreke, Tendai, Tizauone, Emmanuel, Mapondera, Prichard, Chitsike, Inam, Cakana, Andrew and Mavenyengwa, Rooyen (2020) 'Sepsis in cancer patients residing in Zimbabwe: Spectrum of bacterial and fungal aetiologies and their antimicrobial susceptibility patterns.'. BMC Infectious Diseases, Vol 20, E161.

Chopra-Dewasthaly, Rohini, Dagn, Andreas, Lohinger, Christian, Brunthaler, René, Flöck, Martina, Kargl, Munkhtsetseg, Hegde, Shree ORCID: https://orcid.org/0000-0002-6673-7780, Spergser, Joachim and Rosengarten, Renate (2022) 'Sheep Infection Trials with ‘Phase-Locked’ Vpma Expression Variants of Mycoplasma agalactiae—Towards Elucidating the Role of a Multigene Family Encoding Variable Surface Lipoproteins in Infection and Disease'. Microorganisms, Vol 10, Issue 4, e815.

Cocker, Derek, Birgand, Gabriel, Zhu, Nina, Rodriguez-Manzano, Jesus, Ahmad, Raheelah, Jambo, Kondwani ORCID: https://orcid.org/0000-0002-3195-2210, Levin, Anna S. and Holmes, Alison (2024) 'Healthcare as a driver, reservoir and amplifier of antimicrobial resistance: opportunities for interventions'. Nature Reviews Microbiology, Vol 22, Issue 10, pp. 636-649.

Coon, Kerri, Hegde, Shivanand and Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 (2022) 'Inter-species microbiome transplantation recapitulates microbial acquisition in mosquitoes'. Microbiome, Vol 10, Issue 58.

Daher, Andre, Aljayyoussi, Ghaith, Pereira, Dhelio, Lacerda, Marcus V G, Alexandre, Márcia A A, Nascimento, Cristiana T, Alves, Júlio Castro, da Fonseca, Laís Bastos, da Silva, Diego Medeiros Dias, Pinto, Douglas Pereira, Rodrigues, Danielle Fonseca, Silvino, Ana Carolina Rios, de Sousa, Taís Nóbrega, de Brito, Cristiana Ferreira Alves, terKuile, Feiko ORCID: https://orcid.org/0000-0003-3663-5617 and Lalloo, David ORCID: https://orcid.org/0000-0001-7680-2200 (2019) 'Pharmacokinetics/pharmacodynamics of chloroquine and artemisinin-based combination therapy with primaquine.'. Malaria Journal, Vol 18, Issue 1, p. 325.

Datiko, Daniel G, Yassin, Mohammed A., Theobald, Sally ORCID: https://orcid.org/0000-0002-9053-211X and Cuevas, Luis ORCID: https://orcid.org/0000-0002-6581-0587 (2017) 'A community-based Isoniazid preventive therapy for the prevention of childhood tuberculosis in Ethiopia.'. International Journal of Tuberculosis and Lung Disease, Vol 21, Issue 9, 1002-1007(6).

Davies, Gareth, Jordan, Sue, Brooks, Caroline J, Thayer, Daniel, Storey, Melanie, Morgan, Gareth, Allen, Stephen ORCID: https://orcid.org/0000-0001-6675-249X, Garaiova, Iveta, Plummer, Sue and Gravenor, Mike (2018) 'Long term extension of a randomised controlled trial of probiotics using electronic health records.'. Scientific Reports, Vol 8, Issue 1, p. 7668.

De Jong, Hanna K., Achouiti, Ahmed, Koh, Gavin C. K. W., Parry, Christopher, Baker, Stephen, Faiz, Mohammed Abul, van Dissel, Jaap T., Vollaard, Albert M., van Leeuwen, Ester M. M., Roelofs, Joris J. T. H., de Vos, Alex F., Roth, Johannes, van der Poll, Tom, Vogl, Thomas and Wiersinga, Willem Joost (2015) 'Expression and Function of S100A8/A9 (Calprotectin) in Human Typhoid Fever and the Murine Salmonella Model'. PLoS Neglected Tropical Diseases, Vol 9, Issue 4, e0003663.

Divala, Titus H, Fielding, Katherine L, Nliwasa, Marriott, Sloan, Derek J, Gupta-Wright, Ankur and Corbett, Elizabeth ORCID: https://orcid.org/0000-0002-3552-3181 (2018) 'Sensitivity and specificity of using trial-of-antibiotics versus sputum mycobacteriology for diagnosis of tuberculosis: protocol for a systematic literature review.'. Systematic Reviews, Vol 7, Issue 1, p. 141.

Dyson, Zoe A, Ashton, Philip M, Khanam, Farhana, Chunga Chirambo, Angeziwa, Shakya, Mila, Meiring, James E, Tonks, Susan, Karkey, Abhilasha, Msefula, Chisomo, Clemens, John D, Dunstan, Sarah J, Baker, Stephen, Dougan, Gordon, Pitzer, Virginia E, Basnyat, Buddha, Qadri, Firdausi, Heyderman, Robert S, Gordon, Melita, Pollard, Andrew J and Holt, Kathryn E (2024) 'Pathogen diversity and antimicrobial resistance transmission of Salmonella enterica serovars Typhi and Paratyphi A in Bangladesh, Nepal, and Malawi: a genomic epidemiological study.'. Lancet Microbe, Vol 5, Issue 8, p. 100841.

Edwards, Thomas, Williams, Christopher, Olwala, Macrine, Andang’o, Pauline, Otieno, Walter, Nalwa, Grace N., Akindolire, Abimbola, CubasAtienzar, Ana, Ross, Toby, Tongo, Olukemi O., Adams, Emily ORCID: https://orcid.org/0000-0002-0816-2835, Nabwera, Helen and Allen, Stephen (2023) 'Molecular surveillance reveals widespread colonisation by carbapenemase and extended spectrum beta-lactamase producing organisms in neonatal units in Kenya and Nigeria'. Antimicrobial Resistance & Infection Control, Vol 12, Issue 1, e14.

Edwards, Thomas, Sasaki, Shugo, Williams, Chris, Hobbs, Glyn, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405, Evans, Katie and Adams, Emily ORCID: https://orcid.org/0000-0002-0816-2835 (2018) 'Speciation of common Gram-negative pathogens using a highly multiplexed high resolution melt curve assay'. Scientific Reports, Vol 8, e1114.

Enne, Virve I, Aydin, Alp, Baldan, Rossella, Owen, Dewi R, Richardson, Hollian, Ricciardi, Federico, Russell, Charlotte, Nomamiukor-Ikeji, Brenda O., Swart, Ann Marie, High, Juliet, Colles, Antony, Barber, Julie A, Gant, Vanya, Livermore, David M and O’Grady, Justin (2022) 'Multicentre evaluation of two multiplex PCR platforms for the rapid microbiologicalinvestigation of nosocomial pneumonia in UK ICUs: the INHALE WP1 study'. Thorax, Vol 77, Issue 12, pp. 1220-1228.

Feng, Siyuan, Liu, Yan, Liang, Wanfei, Ahmed, Mohamed Abd El-Gawad El-Sayed, Zhao, Zihan, Shen, Cong, Roberts, Adam P. ORCID: https://orcid.org/0000-0002-0760-3088, Liang, Lujie, Liao, Liya, Zhong, Zhijuan, Guo, Zhaowang, Yang, Yongqiang, Wen, Xin, Chen, Hongtao and Tian, Guo-bao (2020) 'Involvement of transcription elongation factor GreA in Mycobacterium viability, antibiotic susceptibility, and intracellular fitness'. Frontiers in Microbiology, Vol 11, e413.

Fröhlich, Benjamin, Dasanna, Anil K., Lansche, Christine, Czajor, Julian, Sanchez, Cecilia P., Cyrklaff, Marek, Yamamoto, Akihisa, Craig, Alister ORCID: https://orcid.org/0000-0003-0914-6164, Schwarz, Ulrich S., Lanzer, Michael and Tanaka, Motomu (2021) 'Functionalized supported membranes for quantifying adhesion of P. falciparum-infected erythrocytes'. Biophysical Journal, Vol 120, Issue 16, pp. 3315-3328.

Ghebrehewet, Sam, Shepherd, Wendi, Panford-Quainoo, Edwin, Shantikumar, Saran, Decraene, Valerie, Rajendran, Rajesh, Kaushal, Menaal, Akuffo, Afua, Ayerh, Dinah and Amofah, George (2020) 'Implementation of a Delayed Prescribing Model to Reduce Antibiotic Prescribing for Suspected Upper Respiratory Tract Infections in a Hospital Outpatient Department, Ghana'. Antibiotics, Vol 9, Issue 11, p. 773.

Haak, Bastiaan W, de Jong, Hanna K, Kostidis, Sarantos, Giera, Martin, Maude, Rapeephan R, Samad, Rasheda, Wijedoru, Lalith, Ghose, Aniruddha, Faiz, Mohammed Abul, Parry, Christopher and Wiersinga, W Joost (2020) 'Altered Patterns of Compositional and Functional Disruption of the Gut Microbiota in Typhoid Fever and Nontyphoidal Febrile Illness'. Open Forum Infectious Diseases, Vol 7, Issue 7, ofaa251.

Hardstaff, Joanne L., Clough, Helen E., Lutje, Vittoria, McIntyre, K. Marie, Harris, John P., Garner, Paul ORCID: https://orcid.org/0000-0002-0607-6941 and O'Brien, Sarah J. (2018) 'Foodborne and Food-Handler Norovirus Outbreaks: A Systematic Review'. Foodborne Pathogens and Disease, Vol 15, Issue 10, pp. 589-597.

Hegde, Shivanand, Brettell, Laura, Quek, Shannon ORCID: https://orcid.org/0000-0002-1583-9541, Etebari, Kayvan, Saldaña, Miguel A., Asgari, Sassan, Coon, Kerri L., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 (2024) 'Aedes aegypti gut transcriptomes respond differently to microbiome transplants from field‐caught or laboratory‐reared mosquitoes'. Environmental Microbiology, Vol 26, Issue 2, e16576.

Hegde, Shree ORCID: https://orcid.org/0000-0002-6673-7780, Shi, Daniel W., Johnson, John C., Geesala, Ramasatyaveni, Zhang, Ke, Lin, You-Min and Shi, Xuan-Zheng (2022) 'Mechanistic Study of Coffee Effects on Gut Microbiota and Motility in Rats'. Nutrients, Vol 14, Issue 22, e4877.

Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Holt, Katherine, Meehan, Connor and Sheppard, Samuel (2021) 'Addressing parachute research and removing barriers for LMIC researchers in Microbial Genomics'. Microbial Genomics, Vol 7, Issue 10, 000722.

Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Brindle, Richard, Morgan-McCalla, Andrina, Peters, Keisha and Thomson, Nicholas R. (2019) 'Caribbean multi-centre study of Klebsiella pneumoniae: whole genome sequencing, antimicrobial resistance and virulence factors'. Microbial Genomics, Vol 5, Issue 5.

Hoffmann, Guillaume, Lukarska, Maria, Clare, Rachel ORCID: https://orcid.org/0000-0002-3945-0530, Masters, Ellen, Johnston, Kelly, Ford, Louise, Turner, Joseph ORCID: https://orcid.org/0000-0002-2185-5476, Ward, Steve ORCID: https://orcid.org/0000-0003-2331-3192, Taylor, Mark ORCID: https://orcid.org/0000-0003-3396-9275, Jensen, Malene Ringkjøbing and Palencia, Andrés (2024) 'Targeting a microbiota Wolbachian aminoacyl-tRNA synthetase to block its pathogenic host.'. Science Advances, Vol 10, Issue 28, eado1453.

Howard, Alex, Aston, Stephen, Gerada, Alessandro, Reza, Nada, Bincalar, Jason, Mwandumba, Henry ORCID: https://orcid.org/0000-0003-4470-3608, Butterworth, Tom, Hope, William and Buchan, Iain (2024) 'Antimicrobial learning systems: an implementation blueprint for artificial intelligence to tackle antimicrobial resistance.'. The Lancet. Digital health, Vol 6, Issue 1, e79-e86.

Hyde, J, Correa, M, Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185, Steven, B and Brankney, D (2020) 'Limited influence of the microbiome on the transcriptional profile of female Aedes aegypti mosquitoes'. Scientific Reports, Vol 10, Issue 10880.

Jin, Celina, Gibani, Malick M, Pennington, Shaun. H ORCID: https://orcid.org/0000-0002-7160-6275, Liu, Xinxue, Ardrey, Alison, Aljayyoussi, Ghaith, Moore, Maria, Angus, Brian, Parry, Christopher, Biagini, Giancarlo ORCID: https://orcid.org/0000-0001-6356-6595, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 and Pollard, Andrew J (2019) 'Treatment responses to Azithromycin and Ciprofloxacin in uncomplicated Salmonella Typhi infection: A comparison of Clinical and Microbiological Data from a Controlled Human Infection Model'. PLoS Neglected Tropical Diseases, Vol 13, Issue 12, e0007955.

John, Daniel, Michael, Daryn, Dabcheva, Maya, Hulme, Eleri, Illanes, Julio, Webberley, Tom, Wang, Duolao ORCID: https://orcid.org/0000-0003-2788-2464 and Plummer, Sue (2024) 'A double-blind, randomized, placebo-controlled study assessing the impact of probiotic supplementation on antibiotic induced changes in the gut microbiome'. Frontiers in Microbiomes, Vol 3.

Kalizang’oma, Akuzike, Kwambana-Adams, Brenda, Chan, Jia Mun, Viswanath, Aishwarya, Gori, Andrea, Richard, Damien, Jolley, Keith A., Lees, John, Goldblatt, David, Beleza, Sandra, Bentley, Stephen D., Heyderman, Robert S., Chaguza, Chrispin and Dekker, John P. (2022) 'Novel Multilocus Sequence Typing and Global Sequence Clustering Schemes for Characterizing the Population Diversity of Streptococcus mitis'. Journal of Clinical Microbiology, Vol 61, Issue 1.

Kirchhelle, Claas, Roberts, Adam ORCID: https://orcid.org/0000-0002-0760-3088 and Singer, Andrew C. (2020) 'Antibiotic Resistance Could Lead to More COVID-19 Deaths'. Scientific American.

Kirchhelle, Claas and Roberts, Adam ORCID: https://orcid.org/0000-0002-0760-3088 (2022) 'Embracing the monsters: moving from infection control to microbial management'. Lancet Microbe, Vol 3, Issue 11, e806-e807.

Kozlova, Elena V., Hegde, Shivanand, Roundy, Christopher M., Golovko, George, Saldaña, Miguel A., Hart, Charles E., Anderson, Enyia, Hornett, Emily, Khanipov, Kamil, Popov, Vsevolod L., Pimenova, Maria, Zhou, Yiyang, Fovanov, Yuriy, Weaver, Scott C., Routh, Andrew L., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 (2021) 'Microbial interactions in the mosquito gut determine Serratia colonization and blood-feeding propensity'. The ISME Journal, Vol 15, pp. 93-108.

Lo, Stephanie W, Gladstone, Rebecca A, van Tonder, Andries J, Hawkins, Paulina A, Kwambana-Adams, Brenda, Cornick, Jennifer, Madhi, Shabir A, Nzenze, Susan A, du Plessis, Mignon, Kandasamy, Rama, Carter, Philip E, Köseoglu Eser, Özgen, Ho, Pak Leung, Elmdaghri, Naima, Shakoor, Sadia, Clarke, Stuart C, Antonio, Martin, Everett, Dean, von Gottberg, Anne, Klugman, Keith P, McGee, Lesley, Breiman, Robert F and Bentley, Stephen D (2018) 'Global distribution of invasive serotype 35D Streptococcus pneumoniae post-PCV13 introduction'. Journal of Clinical Microbiology, Vol 56, Issue 7, e00228-18.

MacPherson, Eleanor ORCID: https://orcid.org/0000-0002-7142-1158, Reynolds, Joanna, Sanudi, Esnart, Nkaombe, Alexander, Mankhomwa, John, Dixon, Justin and Chandler, Clare I. R. (2022) 'Understanding antimicrobial use in subsistence farmers in Chikwawa District Malawi, implications for public awareness campaigns'. PLOS Global Public Health, Vol 2, Issue 6, e0000314.

McCann, Naina, Scott, Peter, Parry, Christopher and Brown, Michael (2022) 'Antimicrobial agents for the treatment of enteric fever chronic carriage: A systematic review'. PLoS ONE, Vol 17, Issue 7, e0272043.

Mekhaiel, David, Czajkowsky, Daniel M, Andersen, Jan Terje, Shi, Jianguo, El-Faham, Marwa, Doenhoff, Michael, McIntosh, Richard S, Sandlie, Inger, He, Jianfeng, Hu, Jun, Shao, Zhifeng and Pleass, Richard ORCID: https://orcid.org/0000-0001-7438-8296 (2011) 'Polymeric human Fc-fusion proteins with modified effector functions.'. Scientific reports, Vol 1, p. 124.

Meredith, J. M., Munks, R. J. L., Grail, W., Hurd, H., Eggleston, P. and Lehane, Mike (2006) 'A novel association between clustered NF-kappa B and C/EBP binding sites is required for immune regulation of mosquito Defensin genes'. Insect Molecular Biology, Vol 15, Issue 4, pp. 393-401.

Mitsi, Elena, Roche, A M, Reiné, Jesús, Zangari, T, Owugha, Jessica, Pennington, Shaun ORCID: https://orcid.org/0000-0002-7160-6275, Gritzfeld, Jenna, Wright, Angela, Collins, Andrea ORCID: https://orcid.org/0000-0002-4094-1572, Van Selm, S, De Jong, M I, Gordon, Stephen ORCID: https://orcid.org/0000-0001-6576-1116, Weiser, J N and Ferreira, Daniela ORCID: https://orcid.org/0000-0002-0594-0902 (2016) 'Agglutination by anti-capsular polysaccharide antibody is associated with protection against experimental human pneumococcal carriage'. Mucosal Immunology, Vol 10, pp. 385-394.

Molina-Moya, Barbara, Abdurrahman, Saddiq T, Madukaji, Laura I, Kiréopori Gomgnimbou, Michel, Spinasse, Lizania, Gomes-Fernandes, Meissiner, Magdinier Gomes, Harrison, Kacimi, Sarah, Dacombe, Russell ORCID: https://orcid.org/0000-0002-6705-1537, Bimba, John S, Lawson, Lovett, Sola, Christophe, Cuevas, Luis E ORCID: https://orcid.org/0000-0002-6581-0587 and Dominguez, Jose (2018) 'Genetic characterization of Mycobacterium tuberculosis complex isolates circulating in Abuja, Nigeria'. Infection and Drug Resistance, Vol Volume 2018:, Issue 11, pp. 1617-1625.

Moore, Catrin E. and Parry, Christopher (2017) 'Antimicrobial susceptibility of uropathogens isolated from Cambodian children'. Paediatrics and international child health, Vol 37, Issue 3, p. 233.

Muangnoicharoen, Sant, Johnson, David, Looareesuwan, S., Krudsood, S. and Ward, Steve ORCID: https://orcid.org/0000-0003-2331-3192 (2009) 'Role of Known Molecular Markers of Resistance in the Antimalarial Potency of Piperaquine and Dihydroartemisinin In Vitro'. Antimicrobial Agents and Chemotherapy, Vol 53, Issue 4, pp. 1362-1366.

Mullish, B. H., Michael, D. R., Dabcheva, M., Webberley, T. S., Coates, N., John, D. A., Wang, Duolao ORCID: https://orcid.org/0000-0003-2788-2464, Luo, Y., Plummer, S. F. and Marchesi, J. R. (2024) 'Authors' reply to letter: He who controls Clostridia and Bacteroidia controls the gut microbiome: The concept of targeted probiotics to restore the balance of keystone taxa in irritable bowel syndrome'. Neurogastroenterology & Motility, Vol 36, Issue 8, e14820.

Mullish, Benjamin H, Marchesi, Julian R, McDonald, Julie A K, Pass, Daniel A, Masetti, Giulia, Michael, Daryn R, Plummer, Sue, Jack, Alison A, Davies, Thomas S, Hughes, Timothy R and Wang, Duolao ORCID: https://orcid.org/0000-0003-2788-2464 (2021) 'Probiotics reduce self-reported symptoms of upper respiratory tract infection in overweight and obese adults: should we be considering probiotics during viral pandemics?'. Gut microbes, Vol 13, Issue 1, pp. 1-9.

Mwai, L., Ochong, Edwin, Abdirahman, A., Kiara, S. M., Ward, Stephen ORCID: https://orcid.org/0000-0003-2331-3192, Kokwaro, G., Sasi, P., Marsh, Kevin, Borrmann, S., Mackinnon, M. and Nzila, Alexis (2009) 'Chloroquine resistance before and after its withdrawal in Kenya'. Malaria Journal, Vol 8, p. 106.

Nabwera, Helen, Espinoza, Josh L., Worwui, Archibald, Betts, Modupeh, Okoi, Catherine, Sesay, Abdul K., Bancroft, Rowan, Agbla, Schadrac C., Jarju, Sheikh, Bradbury, Richard S., Colley, Mariama, Jallow, Amadou T., Liu, Jie, Houpt, Eric R, Prentice, Andrew M., Antonio, Martin, Bernstein, Robin M, Dupont, Christopher L. and Kwambana-Adams, Brenda A. (2021) 'Interactions between fecal gut microbiome, enteric pathogens, and energy regulating hormones among acutely malnourished rural Gambian children'. EBioMedicine, Vol 73, e103644.

Ndhlovu, Victor, Kiran, Anmol, Sloan, Derek J, Mandala, Wilson, Nliwasa, Marriott, Everett, Dean B, Kumwenda, Benjamin, Mwapasa, Mphatso, Kontogianni, Konstantina, Kamdolozi, Mercy, Corbett, Elizabeth, Caws, Maxine ORCID: https://orcid.org/0000-0002-9109-350X and Davies, Gerry (2020) 'Characterization of DNA methylation in Malawian clinical isolates.'. PeerJ, Vol 8, e10432.

Osa, Morichika, Belo, Maria Cecilia, Dela Merced, Zita, Villanueva, Annavi Marie G, Mauhay, Jaira, Celis, Alyannah, Catli, Melissa, Suzuki, Shuichi, Ukawa, Tatsuya, Tamaki, Shingo, Dhoubhadel, Bhim Gopal, Ariyoshi, Koya, Telan, Elizabeth Freda O, Umipig, Dorcas Valencia, Parry, Christopher, Saito, Nobu and Smith, Chris (2021) 'Performance of MALDI-TOF Mass Spectrometry in the Philippines'. Tropical Medicine and Infectious Disease, Vol 6, Issue 3, p. 112.

Pallett, Scott Jc, Mistry, Rakhee, Lambert, Zoe L, Woolley, Stephen, Abbara, Aula, Breathnach, Aodhan O, Lamb, Lucy E, Williams, Andrew, Mughal, Nabeela, Moshynets, Olena, Hughes, Stephen J, O'Shea, Matthew K and Moore, Luke Sp (2024) 'Conflict and catastrophe-related severe burn injuries: A challenging setting for antimicrobial decision-making.'. The Journal of infection, Vol 89, Issue 3, p. 106224.

Pongtavornpinyo, W., Hastings, Ian ORCID: https://orcid.org/0000-0002-1332-742X, Dondorp, A., White, L. J., Maude, R. J., Saralamba, S., Day, N. P., White, N. J. and Boni, M. F. (2009) 'Probability of emergence of antimalarial resistance in different stages of the parasite life cycle'. Evolutionary Applications, Vol 2, Issue 1, pp. 52-61.

Roberts, Adam ORCID: https://orcid.org/0000-0002-0760-3088 (2020) 'Swab and Send: a citizen science, antibiotic discovery project'. Future Science OA, Vol 6, Issue 6.

Roditakis, E., Grispou, M., Morou, Evangelia, Kristoffersen, J. B., Roditakis, N., Nauen, R., Vontas, John and Tsagkarakou, A. (2009) 'Current status of insecticide resistance in Q biotype Bemisia tabaci populations from Crete'. Pest Management Science, Vol 65, Issue 3, pp. 313-322.

Rylance, Jamie ORCID: https://orcid.org/0000-0002-2323-3611, Kankwatira, Anstead, Nelson, David E., Toh, Evelyn, Day, Richard B, Lin, Huaiying, Gao, Xiang, Dong, Qunfeng, Sodergren, Erica, Weinstock, George M, Heyderman, Robert S, Twigg III, Homer L and Gordon, Stephen ORCID: https://orcid.org/0000-0001-6576-1116 (2016) 'Household air pollution and the lung microbiome of healthy adults in Malawi: a cross-sectional study'. BMC Microbiology, Vol 16, e182.

Sant’Anna, Mauricio RV, Diaz-Albiter, Hector, Aguiar-Martins, Kelsilândia, Al-Salem, Waleed, Cavalcante, Reginaldo R, Dillon, Viv M, Bates, Paul A, Genta, Fernando A and Dillon, Rod J (2014) 'Colonisation resistance in the sand fly gut: Leishmania protects Lutzomyia longipalpis from bacterial infection'. Parasites & Vectors, Vol 7, e329.

Shaw, Liam, Ribeiro, Andre L. R., Levine, Adam P, Pontikos, Nikolas, Balloux, Francois, Segal, Anthony W., Roberts, Adam ORCID: https://orcid.org/0000-0002-0760-3088 and Smith, Andrew (2017) 'The Human Salivary Microbiome Is Shaped by Shared Environment Rather than Genetics: Evidence from a Large Family of Closely Related Individuals'. mBio, Vol 8, Issue 5, e01237-17.

Smith, Alva, Hearn, Jack ORCID: https://orcid.org/0000-0003-3358-4949, Taylor, Clare, Wheelhouse, Nick, Kaczmarek, Maciej, Moorhouse, Edwin and Singleton, Ian (2019) 'Listeria monocytogenes isolates from ready to eat plant produce are diverse and have virulence potential'. International Journal of Food Microbiology, Vol 299, pp. 23-32.

Tao, Chen-Yang, Shang, Jin, Chen, Tao ORCID: https://orcid.org/0000-0002-5489-6450, Yu, Dahai, Jiang, Yu-Min, Liu, Dong, Cheng, Gen-Yang, Xiao, Jing and Zhao, Zhan-Zheng (2019) 'Impact of antimalarial (AM) on serum lipids in systemic lupus erythematosus (SLE) patients: A systematic review and meta-analysis'. Medicine, Vol 98, Issue 14, e15030.

Thai, Phan Vuong Khac, Ha, Dang Thi Minh, Hanh, Nguyen Thi, Day, Jeremy, Dunstan, Sarah, Nhu, Nguyen Thi Quynh, Kiet, Vo Sy, Lan, Nguyen Huu, Dung, Nguyen Huy, Lan, Nguyen Thi Ngoc, Thuong, Nguyen Thuong, Lan, Nguyen Ngoc, Liễu, Phạm Thị Thúy, Hồng, Nguyễn Thị, Điệp, Đào Công, Thanh, Nguyễn Thị Kim, Hội, Nguyễn Văn, Nghĩa, Nguyễn Văn, Đại, Trương Ngọc, Minh, Hoàng Quang, Thơm, Nguyễn Văn, Farrar, Jeremy and Caws, Maxine ORCID: https://orcid.org/0000-0002-9109-350X (2018) 'Bacterial risk factors for treatment failure and relapse among patients with isoniazid resistant tuberculosis'. BMC Infectious Diseases, Vol 18, Issue 1.

Thomson-Luque, Richard, Votborg-Novél, Lasse, Ndovie, Wanangwa, Andrade, Carolina M., Niangaly, Moussa, Attipa, Charalampos, Lima, Nathalia F., Coulibaly, Drissa, Doumtabe, Didier, Guindo, Bouréima, Tangara, Bourama, Maiga, Fayçal, Kone, Abdoulaye Kassoum, Traore, Karim, Kayentao, Kassoum, Ongoiba, Aissata, Doumbo, Safiatou, Thera, Mahamadou A., Traoré, Boubacar, Seydel, Karl, Osório, Nuno S. and Portugal, Silvia (2021) 'Plasmodium falciparum transcription in different clinical presentations of malaria associates with circulation time of infected erythrocytes'. Nature Communications, Vol 12, Issue 4711.

Tian, Tian, Zhang, Xiaobo, Luo, Tao, Wang, Duolao ORCID: https://orcid.org/0000-0003-2788-2464, Sun, Yuping and Dai, Jianghong (2021) 'Effects of Short-Term Dietary Fiber Intervention on Gut Microbiota in Young Healthy People'. Diabetes, Metabolic Syndrome and Obesity: Targets and Therapy, Vol Volume 14, pp. 3507-3516.

Whyteside, Graham, Alcocer, Marcos J. C., Kumita, Janet R., Dobson, Christopher M., Lazarou, Maria, Pleass, Richard ORCID: https://orcid.org/0000-0001-7438-8296 and Archer, David B. (2011) 'Native-state stability determines the extent of degradation relative to secretion of protein variants from Pichia pastoris.'. PLoS ONE, Vol 6, Issue 7, e22692.

Wingfield, Tom ORCID: https://orcid.org/0000-0001-8433-6887, Ball, Robert, Woolley, Stephen D., Campbell, Fiona, Heath, Richard M., Beeching, Nicholas ORCID: https://orcid.org/0000-0002-7019-8791 and Turtle, Lance (2018) 'The Brief Case: A Rare Case of Invasive Amebiasis Requiring Emergency Subtotal Colectomy in an HIV-Positive Man'. Journal of Clinical Microbiology, Vol 56, Issue 8, e01703-17.

Yee Mon, Kristel J., Zhu, Hongya, Daly, Ciarán W.P., Vu, Luyen T., Smith, Norah L., Patel, Ravi, Topham, David J., Scheible, Kristin, Jambo, Kondwani ORCID: https://orcid.org/0000-0002-3195-2210, Le, Minh T.N., Rudd, Brian D. and Grimson, Andrew (2021) 'MicroRNA-29 specifies age-related differences in the CD8+ T cell immune response'. Cell Reports, Vol 37, Issue 6, p. 109969.

de Steenhuijsen Piters, Wouter A A, Jochems, Simon ORCID: https://orcid.org/0000-0002-4835-1032, Mitsi, Elena, Rylance, Jamie ORCID: https://orcid.org/0000-0002-2323-3611, Pojar, Sherin ORCID: https://orcid.org/0000-0002-7746-3279, Nikolaou, Elissavet, German, Esther, Holloway, Mark, Carniel, Beatriz, Chu, Mei Ling J N, Arp, Kayleigh, Sanders, Elisabeth A M, Ferreira, Daniela ORCID: https://orcid.org/0000-0002-0594-0902 and Bogaert, Debby (2019) 'Interaction between the nasal microbiota and S. pneumoniae in the context of live-attenuated influenza vaccine.'. Nature Communications, Vol 10, Issue 1, p. 2981.

Book Section

Beeching, Nicholas ORCID: https://orcid.org/0000-0002-7019-8791 and Erdem, H (2016) 'Brucellosis' in: Infectious Diseases, 4, London, elsevier, pp. 1098-1101.

Beeching, Nicholas ORCID: https://orcid.org/0000-0002-7019-8791 (2016) 'Endemic treponematoses' in: Infectious Diseases, 4th edition, volume 2, London, Elsevier, pp. 961-965.

Conference or Workshop Item

Hubbard, Alasdair ORCID: https://orcid.org/0000-0001-6668-9179, Mason, Jenifer, Roberts, Paul, Parry, Christopher, Corless, Caroline, Aartsen, John van, Howard, Alex, Bulgasim, Issra, Fraser, Alice, Adams, Emily ORCID: https://orcid.org/0000-0002-0816-2835, Roberts, Adam ORCID: https://orcid.org/0000-0002-0760-3088 and Edwards, Thomas (2022) 'Piperacillin/tazobactam resistance in a clinical isolate of Escherichia colidue to IS26-mediated amplification of blaTEM-1B' in Meeting.

Thesis

Goodman, Richard (2022) Investigating the impact of intercellular and intracellular mobile genetic element transfer on the evolution of antimicrobial resistance in Enterobacterales, Thesis (Doctoral), Liverpool School of Tropical Medicine.

Hutton, William (2022) Natural Drivers of Antimicrobial Resistance, Thesis (Doctoral), Liverpool School of Tropical Medicine.

Pojar, Sherin ORCID: https://orcid.org/0000-0002-7746-3279 (2021) Susceptibility to pneumococcal colonization: identifying critical pneumococcal and mucosal markers, Thesis (Doctoral), Liverpool School of Tropical Medicine.