Items where LSTM Author is "Heinz, Eva"

Hegde, Shivanand, Brettell, Laura, Quek, Shannon ORCID: https://orcid.org/0000-0002-1583-9541, Etebari, Kayvan, Saldaña, Miguel A., Asgari, Sassan, Coon, Kerri L., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 (2024) 'Aedes aegypti gut transcriptomes respond differently to microbiome transplants from field‐caught or laboratory‐reared mosquitoes'. Environmental Microbiology, Vol 26, Issue 2, e16576.

Taylor, Melissa, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Gondwe, Mtisunge, Masekela, Refiloe, Morton, Ben ORCID: https://orcid.org/0000-0002-6164-2854, Oronje, Rose, Vercueil, Andre, Abimbola, Seye and Obasi, Angela ORCID: https://orcid.org/0000-0001-6801-8889 (2024) 'Authorship reflexivity statements: additional considerations.'. BMJ Global Health, Vol 9, Issue 1, e014743.

Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Mathew A, Mallewa, Jane, Anscome, Catherine, Zuza, Allan, Roberts, Adam P, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Thomson, Nicholas R and Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 (2023) 'Genomic analysis of extended-spectrum beta-lactamase (ESBL) producing Escherichia coli colonising adults in Blantyre, Malawi reveals previously undescribed diversity'. Microbial Genomics, Vol 9, Issue 6.

Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beala, Mathew A., Mallewa, Jane, Anscombe, Catherine, Zuza, Allan, Roberts, Adam P., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Thomson, Nicholas R. and Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 (2023) Dataset for the article: Genomic analysis of extended-spectrum beta-lactamase (ESBL) producing Escherichia coli colonising adults in Blantyre, Malawi reveals previously undescribed diversity. [Data Collection]

Foo, Aidan, Cerdeira, Louise, Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 and Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 (2023) 'Recovery of metagenomic data from the Aedes aegypti microbiome using a reproducible snakemake pipeline: MINUUR'. Wellcome Open Research, Vol 8, e131.

Williams, David J., Grimont, Patrick A. D., Cazares, Adrián, Grimont, Francine, Ageron, Elisabeth, Pettigrew, Kerry A., Cazares, Daniel, Njamkepo, Elisabeth, Weill, François-Xavier, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Holden, Matthew T. G., Thomson, Nicholas R. and Coulthurst, Sarah J. (2022) 'The genus Serratia revisited by genomics'. Nature Communications, Vol 13, e5195.

Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Mathew A, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Mallewa, Jane, Jewell, Christopher, Faragher, Brian, Thomson, Nicholas R and Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 (2022) 'Colonisation dynamics of extended spectrum beta-lactamase-producing Enterobacterales in the gut of Malawian adults'. Nature Microbiology, Vol 7, Issue 10, pp. 1593-1604.

Logan, Rhiannon ORCID: https://orcid.org/0000-0002-4323-3213, Quek, Shannon ORCID: https://orcid.org/0000-0002-1583-9541, Muthoni, Joseph, von Eicken, Anneliese, Brettell, Laura, Anderson, Enyia, Villena, Marcus E. N., Hegde, Shivanand, Patterson, Grace T., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 and Patterson, Ian ORCID: https://orcid.org/0000-0003-3465-0848 (2022) 'Vertical and Horizontal Transmission of Cell Fusing Agent Virus in Aedes aegypti'. Applied and Environmental Microbiology, Vol 88, Issue 18.

Oboh, Mary Aigbiremo, Faal, Fatou, Adeniji, Oluwagbemisola Elizabeth, Correa, Simon, Amawu, Anthony Uyimulam, Ogban, Ekon, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185, Meremikwu, Martin M. and Amambua-Ngwa, Alfred (2022) 'Multiple Plasmodium falciparum drug resistance polymorphisms identified in a pregnant woman with severe malaria and a concomitant spontaneous abortion in Cross River, Nigeria, West Africa'. Malaria Journal, Vol 21, Issue 1, e160.

Gauld, Jillian S, Olgemoeller, Franziska, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Nkhata, Rose, Bilima, Sithembile, Wailan, Alexander M, Kennedy, Neil, Mallewa, Jane, Gordon, Melita A, Read, Jonathan M, Heyderman, Robert S, Thomson, Nicholas R, Diggle, Peter J and Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 (2022) 'Spatial and genomic data to characterize endemic typhoid transmission'. Clinical Infectious Diseases, Vol 74, Issue 11, pp. 1993-2000.

Quek, Shannon ORCID: https://orcid.org/0000-0002-1583-9541, Cerdeira, Louise, Jeffries, Claire L, Tomlinson, Sean, Walker, Thomas, Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 and Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 (2022) 'Wolbachia endosymbionts in two Anopheles species indicates independent acquisitions and lack of prophage elements'. Microbial Genomics, Vol 8, Issue 4, 000805.

Edwards, Thomas, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, van Aartsen, Jon, Howard, Alex, Roberts, Paul, Corless, Caroline, Fraser, Alice, Williams, Chris, Bulgasim, Issra, Cuevas, Luis ORCID: https://orcid.org/0000-0002-6581-0587, Parry, Christopher M., Roberts, Adam ORCID: https://orcid.org/0000-0002-0760-3088, Adams, Emily ORCID: https://orcid.org/0000-0002-0816-2835, Mason, Jenifer and Hubbard, Alasdair ORCID: https://orcid.org/0000-0001-6668-9179 (2022) 'Piperacillin/tazobactam resistant, cephalosporin susceptible Escherichia coli bloodstream infections are driven by multiple acquisition of resistance across diverse sequence types'. Microbial Genomics, Vol 8, Issue 4, e000789.

Saleh, Sepeedeh ORCID: https://orcid.org/0000-0003-1944-1677, Masekela, Refiloe, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Abimbola, Seye, Morton, Ben ORCID: https://orcid.org/0000-0002-6164-2854, Vercueil, Andre, Reimer, Lisa ORCID: https://orcid.org/0000-0002-9711-4981, Kalinga, Chisomo, Seekles, Maaike ORCID: https://orcid.org/0000-0002-7000-3624, Biccard, Bruce, Muhwa, Jeremiah, Obasi, Angela ORCID: https://orcid.org/0000-0001-6801-8889 and Oriyo, Ndekya (2022) 'Equity in global health research: A proposal to adopt author reflexivity statements'. PLOS Global Public Health, Vol 2, Issue 3, e0000160.

Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Matthew, Mallewa, Jane, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Thomson, Nicholas and Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 (2022) 'Genomic and antigenic diversity of colonising Klebsiella pneumoniae isolates mirrors that of invasive isolates in Blantyre, Malawi'. Microbial Genomics, Vol 8, Issue 3, e000778.

Ingham, Victoria ORCID: https://orcid.org/0000-0001-5708-4741, Tennessen, Jacob A., Lucas, Eric ORCID: https://orcid.org/0000-0003-3892-1668, Elg, Sara, Carrington Yates, Henrietta, Carson, Jessica, Guelbeogo, Wamdaogo Moussa, Sagnon, N’Fale, Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Neafsey, Daniel E. and Ranson, Hilary ORCID: https://orcid.org/0000-0003-2332-8247 (2021) 'Integration of whole genome sequencing and transcriptomics reveals a complex picture of the reestablishment of insecticide resistance in the major malaria vector Anopheles coluzzii'. PLoS Genetics, Vol 17, Issue 12, e1009970.

Goodall, Emily C. A., Isom, Georgia L., Rooke, Jessica L., Pullela, Karthik, Icke, Christopher, Yang, Zihao, Boelter, Gabriela, Jones, Alun, Warner, Isabel, Da Costa, Rochelle, Zhang, Bing, Rae, James, Tan, Wee Boon, Winkle, Matthias, Delhaye, Antoine, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Collet, Jean-Francois, Cunningham, Adam F., Blaskovich, Mark A., Parton, Robert G., Cole, Jeff A., Banzhaf, Manuel, Chng, Shu-Sin, Vollmer, Waldemar, Bryant, Jack A. and Henderson, Ian R. (2021) 'Loss of YhcB results in dysregulation of coordinated peptidoglycan, LPS and phospholipid synthesis during Escherichia coli cell growth'. PLoS Genetics, Vol 17, Issue 12, e1009586.

Cornick, Jennifer, Musicha, Patrick, Peno, Chikondi, Seager, Ezgi, Iroh Tam, Pui-Ying ORCID: https://orcid.org/0000-0002-3682-8892, Bilima, Sithembile, Bennett, Aisleen, Kennedy, Neil, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Cain, Amy (2021) 'Genomic investigation of a suspected Klebsiella pneumoniae outbreak in a neonatal care unit in sub-Saharan Africa'. Microbial Genomics, Vol 7, Issue 11.

Mäklin, Tommi, Kallonen, Teemu, Alanko, Jarno, Samuelsen, Ørjan, Hegstad, Kristin, Mäkinen, Veli, Corander, Jukka, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Honkela, Antti (2021) 'Bacterial genomic epidemiology with mixed samples'. Microbial Genomics, Vol 7, Issue 11.

Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Holt, Katherine, Meehan, Connor and Sheppard, Samuel (2021) 'Addressing parachute research and removing barriers for LMIC researchers in Microbial Genomics'. Microbial Genomics, Vol 7, Issue 10, 000722.

Morton, Ben ORCID: https://orcid.org/0000-0002-6164-2854, Vercueil, A., Masekela, R., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Reimer, Lisa ORCID: https://orcid.org/0000-0002-9711-4981, Saleh, Sepeedeh, Kalinga, C., Seekles, Maaike ORCID: https://orcid.org/0000-0002-7000-3624, Biccard, B., Muhwa, Jeremiah, Abimbola, S., Obasi, Angela ORCID: https://orcid.org/0000-0001-6801-8889 and Oriyo, N. (2021) 'Consensus statement on measures to promote equitable authorship in the publication of research from international partnerships'. Anaesthesia, Vol 77, Issue 3, pp. 264-276.

Horesh, Gal, Taylor-Brown, Alyce, McGimpsey, Stephanie, Lassalle, Florent, Corander, Jukka, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Thomson, Nicholas R. (2021) 'Different evolutionary trends form the twilight zone of the bacterial pan-genome'. Microbial Genomics, Vol 7, Issue 9, 000670.

Grinter, Rhys, Morris, Faye C., Dunstan, Rhys A., Leung, Pok Man, Kropp, Ashleigh, Belousoff, Matthew, Gunasinghe, Sachith D., Scott, Nichollas E., Beckham, Simone, Peleg, Anton Y., Greening, Chris, Li, Jian, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Lithgow, Trevor (2021) 'BonA from Acinetobacter baumannii Forms a Divisome-Localized Decamer That Supports Outer Envelope Function'. mBio, Vol 12, Issue 4, e01480-21.

Bunduki, Gabriel Kambale, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Phiri, Vincent Samuel, Noah, Patrick, Feasey, Nicholas ORCID: https://orcid.org/0000-0003-4041-1405 and Musaya, Janelisa (2021) 'Virulence factors and antimicrobial resistance of uropathogenic Escherichia coli (UPEC) isolated from urinary tract infections: a systematic review and meta-analysis'. BMC Infectious Diseases, Vol 21, p. 753.

Walker, Thomas, Quek, Shannon ORCID: https://orcid.org/0000-0002-1583-9541, Jeffries, Claire L., Bandibabone, Janvier, Dhokiya, Vishaal, Bamou, Roland, Kristan, Mojca, Messenger, Louisa A., Gidley, Alexandra, Hornett, Emily, Anderson, Enyia, Cansado-Utrilla, Cintia, Hegde, Shivanand, Bantuzeko, Chimanuk, Stevenson, Jennifer, Lobo, Neil F., Wagstaff, Simon ORCID: https://orcid.org/0000-0003-0577-5537, Nkondjio, Christophe Antonio, Irish, Seth R., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 (2021) 'Stable high-density and maternally inherited Wolbachia infections in Anopheles moucheti and Anopheles demeilloni mosquitoes'. Current Biology, Vol 31, Issue 11, pp. 2310-2320.

Will, Robert C., Ramamurthy, Thandavarayan, Sharma, Naresh Chand, Veeraraghavan, Balaji, Sangal, Lucky, Haldar, Pradeep, Pragasam, Agila Kumari, Vasudevan, Karthick, Kumar, Dhirendra, Das, Bhabatosh, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Melnikov, Vyacheslav, Baker, Stephen, Sangal, Vartul, Dougan, Gordon and Mutreja, Ankur (2021) 'Spatiotemporal persistence of multiple, diverse clades and toxins of Corynebacterium diphtheriae'. Nature Communications, Vol 12, Issue 1, p. 1500.

Horesh, Gal, Blackwell, Grace, Tonkin-Hill, Gerry, Corander, Jukka, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Thomson, Nicholas (2021) 'A comprehensive and high-quality collection of Escherichia coli genomes and their genes'. Microbial Genomics, Vol 7, Issue 2.

Kozlova, Elena V., Hegde, Shivanand, Roundy, Christopher M., Golovko, George, Saldaña, Miguel A., Hart, Charles E., Anderson, Enyia, Hornett, Emily, Khanipov, Kamil, Popov, Vsevolod L., Pimenova, Maria, Zhou, Yiyang, Fovanov, Yuriy, Weaver, Scott C., Routh, Andrew L., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 (2021) 'Microbial interactions in the mosquito gut determine Serratia colonization and blood-feeding propensity'. The ISME Journal, Vol 15, pp. 93-108.

Bryant, J.A, Morris, F.C, Knowles, T, Maderbocus, R, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Boelter, G, Alodaini, D, Coyler, A, Wotherspoon, P, Staunton, K, Jeeves, M, Browning, D, Sevastsyanovich, Y, Wells, T, Rossiter, A, Bavro, V, Sridhar, P, Ward, D, Chong, Z-S, Goodhall, E, Icke, C, Teo, A, Chng, S-S, Roper, D, Lithgow, T, Cunningham, A, Banzhaf, M, Overduin, M and Henderson, I (2020) 'Structure of dual BON-domain protein DolP identifies phospholipid binding as a new mechanism for protein localisation'. eLife, Vol 2020, Issue 9, e62614.

Horesh, Gal, Fino, Cinzia, Harms, Alexander, Dorman, Mathew J, Parts, Leopold, Gerdes, Kenn, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Thomson, Nicholas Robert (2020) 'Type II and type IV toxin–antitoxin systems show different evolutionary patterns in the global Klebsiella pneumoniae population'. Nucleic Acids Research, Vol 48, Issue 8, pp. 4357-4370.

Loraine, Jessica, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Soontarach, Roseathorn, Blackwell, Grace A, Stabler, Richard A, Voravuthikunchai, Supayang P, Srimanote, Potjanee, Kiratisin, Pattarachai, Thomson, Nicholas R and Taylor, Peter W (2020) 'Genomic and Phenotypic Analyses of Acinetobacter baumannii Isolates From Three Tertiary Care Hospitals in Thailand'. Frontiers in Microbiology, Vol 11, Issue 548.

Mukhopadhyay, Subhankar, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Porreca, Immacolata, Alasoo, Kaur, Yeung, Amy, Yang, Huei-Ting, Schwerd, Tobias, Forbester, Jessica L, Hale, Christine, Agu, Chukwuma A., Choi, Yoon Ha, Rodrigues, Julia, Capitan, Melania, Jostins-Dean, Luke, Thomas, David C., Travis, Simon, Gaffney, Daniel, Skarnes, William C., Thomson, Nicholas, Uhlig, Holm H., Dougan, Gordon and Powrie, Fiona (2019) 'Loss of IL-10 signaling in macrophages limits bacterial killing driven by prostaglandin E2'. The Journal of Experimental Medicine (JEM), Vol 217, Issue 2, e20180649.

Hegde, Shivanand, Nilyanimit, Pornjarim, Kozlova, Elena, Anderson, Enyia, Narra, Hema P, Sahni, Sanjeev K, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185 (2019) 'CRISPR/Cas9-mediated gene deletion of the ompA gene in symbiotic Cedecea neteri impairs biofilm formation and reduces gut colonization of Aedes aegypti mosquitoes.'. PLoS Neglected Tropical Diseases, Vol 13, Issue 12, e0007883.

Van Puyvelde, Sandra, Pickard, Derek, Vandelannoote, Koen, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Barbé, Barbara, de Block, Tessa, Clare, Simon, Coomber, Eve L., Harcourt, Katherine, Sridhar, Sushmita, Lees, Emily A., Wheeler, Nicole E., Klemm, Elizabeth J., Kuijpers, Laura, Mbuyi Kalonji, Lisette, Phoba, Marie-France, Falay, Dadi, Ngbonda, Dauly, Lunguya, Octavie, Jacobs, Jan, Dougan, Gordon and Deborggraeve, Stijn (2019) 'An African Salmonella Typhimurium ST313 sublineage with extensive drug-resistance and signatures of host adaptation'. Nature Communications, Vol 10, Issue 1, e4280.

Martino, F, Tijet, N, Melano, R, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, De Belder, D, Faccone, D, Biondi, E, Rodrigo, V, Vaguez, M, Pasteran, F, Thomson, NR, Corso, A and Gomez, SA (2019) 'Isolation of five Enterobacteriaceae species harbouring blaNDM-1 and mcr-1 plasmids from a single paediatric patient'. PLoS ONE, Vol 14, Issue 9, E0221960.

Ellington, Matthew, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Wailan, Alexander, Dorman, Matthew, De Goffau, Marcus, Cain, Amy, Henson, Sonal, Gleadall, Nicholas, Boinett, Christine, Dougan, Gordon, Brown, Nicholas, Woodford, Neil, Parkhill, Julian, Torok, Estee, Peacock, Sharon and Thomson, Nicholas (2019) 'Contrasting patterns of longitudinal population dynamics and antimicrobial resistance mechanisms in two priority bacterial pathogens over 7 years in a single center'. Genome Biology, Vol 20, e184.

Gibani, Malick M., Jones, Elizabeth, Barton, Amber, Jin, Celina, Meek, Juliette, Camara, Susana, Galal, Ushma, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Rosenberg-Hasson, Yael, Obermoser, Gerlinde, Jones, Claire, Campbell, Danielle, Black, Charlotte, Thomaides-Brears, Helena, Darlow, Christopher, Dold, Christina, Silva-Reyes, Laura, Blackwell, Luke, Lara-Tejero, Maria, Jiao, Xuyao, Stack, Gabrielle, Blohmke, Christoph J., Hill, Jennifer, Angus, Brian, Dougan, Gordon, Galán, Jorge and Pollard, Andrew J. (2019) 'Investigation of the role of typhoid toxin in acute typhoid fever in a human challenge model'. Nature Medicine, Vol 25, pp. 1082-1088.

Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Brindle, Richard, Morgan-McCalla, Andrina, Peters, Keisha and Thomson, Nicholas R. (2019) 'Caribbean multi-centre study of Klebsiella pneumoniae: whole genome sequencing, antimicrobial resistance and virulence factors'. Microbial Genomics, Vol 5, Issue 5.

Deo, Pankaj, Chow, Seong H., Hay, Iain D., Kleifeld, Oded, Costin, Adam, Elgass, Kirstin D., Jiang, Jhih-Hang, Ramm, Georg, Gabriel, Kipros, Dougan, Gordon, Lithgow, Trevor, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Naderer, Thomas (2018) 'Outer membrane vesicles from Neisseria gonorrhoeae target PorB to mitochondria and induce apoptosis'. PLoS Pathogens, Vol 14, Issue 3, e1006945.