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Gallichan, Sarah, Forrest, Sally, Picton-Barlow, Esther, McKeown, Claudia, Moore, Maria, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Feasey, Nicholas
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'Optimized methods for the targeted surveillance of extended-spectrum beta-lactamase-producing Escherichia coli in human stool'. Microbiology Spectrum, Vol 13, Issue 1, e01058-24.
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'An exploration of unusual antimicrobial resistance phenotypes in Salmonella Typhi from Blantyre, Malawi reveals the ongoing role of IncHI1 plasmids'. Gates Open Research, Vol 8, e143.
Gallichan, Sarah, Forrest, Sally, Picton-Barlow, Esther, McKeown, Claudia, Moore, Maria, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Feasey, Nicholas
ORCID: https://orcid.org/0000-0003-4041-1405, Lewis, Joseph
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'Optimized methods for the targeted surveillance of extended-spectrum beta-lactamase-producing <i>Escherichia coli</i> in human stool'. Microbiology Spectrum.
(In Press)
Foo, Aidan, Brettell, Laura, Nichols, Holly L., Medina Muñoz, Miguel, Lysne, Jessica A., Dhokiya, Vish, Hoque, Ananya, Brackney, Doug E., Caragata, Eric P., Hutchinson, Michael L., Jacobs-Lorena, Marcelo, Lampe, David J., Martin, Edwige, Valiente Moro, Claire, Povelones, Michael, Short, Sarah M., Steven, Blaire, Xu, Jiannong, Paustian, Timothy D., Rondon, Michelle R., Hughes, Grant ORCID: https://orcid.org/0000-0002-7567-7185, Coon, Kerri L. and Heinz, Eva
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'MosAIC: An annotated collection of mosquito-associated bacteria with high-quality genome assemblies'. PLoS Biology, Vol 22, Issue 11, e3002897.
Dyer, Naomi, Lucas, Eric ORCID: https://orcid.org/0000-0003-3892-1668, Nagi, Sanjay, McDermott, Daniel, Brenas, Jon, Miles, Alistair, Clarkson, Chris, Mawejje4, Henry, Wilding, Craig, Halfon, Marc, Asma, Hasiba, Heinz, Eva
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'Mechanisms of transcriptional regulation in Anopheles gambiae revealed by allele-specific expression'. Proceedings of the Royal Society B-Biological Sciences, Vol 291, Issue 2031, p. 20241142.
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'Diverse RNA viruses of parasitic nematodes can elicit antibody responses in vertebrate hosts'. Nature Microbiology, Vol 9, Issue 1, pp. 2488-2505.
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Taylor, Melissa, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Gondwe, Mtisunge, Masekela, Refiloe, Morton, Ben
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Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Mathew A, Mallewa, Jane, Anscome, Catherine, Zuza, Allan, Roberts, Adam P, Heinz, Eva
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'Recovery of metagenomic data from the Aedes aegypti microbiome using a reproducible snakemake pipeline: MINUUR'. Wellcome Open Research, Vol 8, e131.
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'Colonisation dynamics of extended spectrum beta-lactamase-producing Enterobacterales in the gut of Malawian adults'. Nature Microbiology, Vol 7, Issue 10, pp. 1593-1604.
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'Equity in global health research: A proposal to adopt author reflexivity statements'. PLOS Global Public Health, Vol 2, Issue 3, e0000160.
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'Genomic and antigenic diversity of colonising Klebsiella pneumoniae isolates mirrors that of invasive isolates in Blantyre, Malawi'. Microbial Genomics, Vol 8, Issue 3, e000778.
Ingham, Victoria ORCID: https://orcid.org/0000-0001-5708-4741, Tennessen, Jacob A., Lucas, Eric
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Goodall, Emily C. A., Isom, Georgia L., Rooke, Jessica L., Pullela, Karthik, Icke, Christopher, Yang, Zihao, Boelter, Gabriela, Jones, Alun, Warner, Isabel, Da Costa, Rochelle, Zhang, Bing, Rae, James, Tan, Wee Boon, Winkle, Matthias, Delhaye, Antoine, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Collet, Jean-Francois, Cunningham, Adam F., Blaskovich, Mark A., Parton, Robert G., Cole, Jeff A., Banzhaf, Manuel, Chng, Shu-Sin, Vollmer, Waldemar, Bryant, Jack A. and Henderson, Ian R.
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Morton, Ben ORCID: https://orcid.org/0000-0002-6164-2854, Vercueil, A., Masekela, R., Heinz, Eva
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'Different evolutionary trends form the twilight zone of the bacterial pan-genome'. Microbial Genomics, Vol 7, Issue 9, 000670.
Grinter, Rhys, Morris, Faye C., Dunstan, Rhys A., Leung, Pok Man, Kropp, Ashleigh, Belousoff, Matthew, Gunasinghe, Sachith D., Scott, Nichollas E., Beckham, Simone, Peleg, Anton Y., Greening, Chris, Li, Jian, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Lithgow, Trevor
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Bunduki, Gabriel Kambale, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Phiri, Vincent Samuel, Noah, Patrick, Feasey, Nicholas
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'A comprehensive and high-quality collection of Escherichia coli genomes and their genes'. Microbial Genomics, Vol 7, Issue 2.
Kozlova, Elena V., Hegde, Shivanand, Roundy, Christopher M., Golovko, George, Saldaña, Miguel A., Hart, Charles E., Anderson, Enyia, Hornett, Emily, Khanipov, Kamil, Popov, Vsevolod L., Pimenova, Maria, Zhou, Yiyang, Fovanov, Yuriy, Weaver, Scott C., Routh, Andrew L., Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Hughes, Grant
ORCID: https://orcid.org/0000-0002-7567-7185
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Bryant, J.A, Morris, F.C, Knowles, T, Maderbocus, R, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Boelter, G, Alodaini, D, Coyler, A, Wotherspoon, P, Staunton, K, Jeeves, M, Browning, D, Sevastsyanovich, Y, Wells, T, Rossiter, A, Bavro, V, Sridhar, P, Ward, D, Chong, Z-S, Goodhall, E, Icke, C, Teo, A, Chng, S-S, Roper, D, Lithgow, T, Cunningham, A, Banzhaf, M, Overduin, M and Henderson, I
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'Structure of dual BON-domain protein DolP identifies phospholipid binding as a new mechanism for protein localisation'. eLife, Vol 2020, Issue 9, e62614.
Horesh, Gal, Fino, Cinzia, Harms, Alexander, Dorman, Mathew J, Parts, Leopold, Gerdes, Kenn, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Thomson, Nicholas Robert
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'Type II and type IV toxin–antitoxin systems show different evolutionary patterns in the global Klebsiella pneumoniae population'. Nucleic Acids Research, Vol 48, Issue 8, pp. 4357-4370.
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'Genomic and Phenotypic Analyses of Acinetobacter baumannii Isolates From Three Tertiary Care Hospitals in Thailand'. Frontiers in Microbiology, Vol 11, Issue 548.
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'Loss of IL-10 signaling in macrophages limits bacterial killing driven by prostaglandin E2'. The Journal of Experimental Medicine (JEM), Vol 217, Issue 2, e20180649.
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'CRISPR/Cas9-mediated gene deletion of the ompA gene in symbiotic Cedecea neteri impairs biofilm formation and reduces gut colonization of Aedes aegypti mosquitoes.'. PLoS Neglected Tropical Diseases, Vol 13, Issue 12, e0007883.
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'An African Salmonella Typhimurium ST313 sublineage with extensive drug-resistance and signatures of host adaptation'. Nature Communications, Vol 10, Issue 1, e4280.
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'Isolation of five Enterobacteriaceae species harbouring blaNDM-1 and mcr-1 plasmids from a single paediatric patient'. PLoS ONE, Vol 14, Issue 9, E0221960.
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'Contrasting patterns of longitudinal population dynamics and antimicrobial resistance mechanisms in two priority bacterial pathogens over 7 years in a single center'. Genome Biology, Vol 20, e184.
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'Investigation of the role of typhoid toxin in acute typhoid fever in a human challenge model'. Nature Medicine, Vol 25, pp. 1082-1088.
Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Brindle, Richard, Morgan-McCalla, Andrina, Peters, Keisha and Thomson, Nicholas R.
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'Caribbean multi-centre study of Klebsiella pneumoniae: whole genome sequencing, antimicrobial resistance and virulence factors'. Microbial Genomics, Vol 5, Issue 5.
Deo, Pankaj, Chow, Seong H., Hay, Iain D., Kleifeld, Oded, Costin, Adam, Elgass, Kirstin D., Jiang, Jhih-Hang, Ramm, Georg, Gabriel, Kipros, Dougan, Gordon, Lithgow, Trevor, Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756 and Naderer, Thomas
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'Outer membrane vesicles from Neisseria gonorrhoeae target PorB to mitochondria and induce apoptosis'. PLoS Pathogens, Vol 14, Issue 3, e1006945.
Data Collection
Heinz, Eva ORCID: https://orcid.org/0000-0003-4413-3756, Pearse, Oliver, Musicha, Patrick, Graf, Fabrice, Lewis, Joseph
ORCID: https://orcid.org/0000-0002-3837-5188 and Feasey, Nicholas
ORCID: https://orcid.org/0000-0003-4041-1405
(2023)
Data for 'Longitudinal analysis within one hospital in sub-Saharan Africa over 20 years reveals repeated replacements of dominant clones of Klebsiella pneumoniae and stresses the importance to include temporal patterns for vaccine design considerations'.
[Data Collection]
Lewis, Joseph ORCID: https://orcid.org/0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beala, Mathew A., Mallewa, Jane, Anscombe, Catherine, Zuza, Allan, Roberts, Adam P., Heinz, Eva
ORCID: https://orcid.org/0000-0003-4413-3756, Thomson, Nicholas R. and Feasey, Nicholas
ORCID: https://orcid.org/0000-0003-4041-1405
(2023)
Dataset for the article: Genomic analysis of extended-spectrum beta-lactamase (ESBL) producing Escherichia coli colonising adults in Blantyre, Malawi reveals previously undescribed diversity.
[Data Collection]